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The CLARIOstar® With ACU Exposes Cells to Ischemia- Reperfusion Conditions and Monitors Their Oxygenation


Andrea Krumm1, C. Carey2, R. Kettenhofen3, M. Schwalfenberg2, J. Hynes2
1Andrea Krumm, BMG LABTECH GmbH, Ortenberg, Germany, 2Luxcel Biosciences Ltd., Cork, Ireland, 3Axiogenesis AG, Cologne, Germany

    CLARIOstar with Atmospheric Control Unit 2
  • Oxygen ramping of atmospheric control unit facilitates control of ischemic and reperfusion insults in cells.
  • Intracellular probe tracks cellular oxygenation during ischemia-reperfusion cycle.
  • Parallel monitoring of ROS and MMP probes allow detailed metabolic characterization of ischemia-reperfusion.


The lack of oxygen supply is associated with a number of life-threatening diseases such as stroke, myocardial infarction or renal failure whereby cells are temporarily deprived of O2 and nutrient (ischemia). Significant cell damage can also occur during the reperfusion phase through oxidative stress and inflammatory responses. Investigating these pathologies in vitro requires an experimental set-up capable of rapid deoxygenation, rapid reperfusion, and parallel monitoring of critical biological parameters including cellular oxygenation and ROS. The ischemia-reperfusion model presented here uses a microplate reader with software-controlled programmable O2 and CO2 regulation (Fig. 1) in combination with MitoXpress®-Intra, (Luxcel Biosciences) which enables real-time monitoring of cellular oxygenation. Data are presented using HepG2 cells and iPS derived cardiomyocytes (Cor.4U®, Axiogenesis).

Ischemia-reperfusion atmospheric conditions

Fig. 1: Example of ischemia-reperfusion atmospheric conditions in the CLARIOstar microplate reader with ACU. O2 and CO2 levels were regulated as defined in the reader software.

Materials & Methods

Cor.4U® iPSC-derived
Intracellular Oxygenation Assay
Oxygenation Assay

CLARIOstar® Microplate Reader
Microplate Reader
with ACU


Fig. 2: Components of ischemia-reperfusion model

  • Clear 96-well plate (Sarstedt)
  • Antimycin (1µM) and FCCP (2.5µM)
  • Dihydroethidium (DHE) (Sigma Aldrich)
  • JC-1 (Cayman Chemical)

Experimental Procedure

HepG2 cells were plated at a density of 25,000 cells/well and returned to culture overnight. Cor.4U cells (Axiogenesis) were plated and maintained as per manufacturer’s instructions. Cellular Oxygenation: Cells were loaded overnight with the intracellular O2 probe MitoXpress-Intra (Luxcel Biosciences) as per manufacturer’s instructions and measured on the CLARIOstar microplate reader using the settings detailed below. Preconfigured measurement protocols and data analysis templates for automatic O2 concentration calculation are available on BMG LABTECH software allowing real-time monitoring of cellular oxygenation. Mitochondrial membrane potential (MMP): Cells were loaded with JC-1 (Cayman Chemical) 30 min prior to measurement as per manufacturer’s instructions and measured ratiometrically using the settings detailed below. A dissipation of MMP reduces J-aggregate formation causing a reduction on aggregate:monomer ratio Reactive Oxygen Species (ROS): Cells were loaded with 2.5µM DHE (Sigma Aldrich) for 30 min prior to measurement and measured using the settings detailed below.

Instrument Settings

Optic settings Time-resolved fluoresceance, bottom optic
Filters Excitation Ex tr
Dichroic LP tr
Emission 645-20
Gain 2300
Well Multichromatic: 2 integration windows
Window 1 Start 30 µs, Time 30 µs
Window 2 Start 70 µs, Time 30 µs
General settings No. of flashes 100
Settling time 0.1 s
Incubation 37°C
Atmospheric control Reduction from room O2 to 1%, 50 min at 1 % O2, increase O2 back to room.

Mitochondrial membrane potential with JC-1
Optic settings Fluorescence intensity, top optic
Mono-chromator Excitation 485-15 485-15
Dichroic 541 511
Emission 595-10 535-10
Gain 1950
General Settings No. of flashes 100
Setting Time 0.1s

Reactive oxygen species with DHE
Optic settings Fluorescence intensity, endpoint, top optic
Mono-chromator Excitation 510-15
Dichroic 560
Emission 615-25
Gain 1700
General Settings No. of flashes 60
Setting Time 0.1s

Results & Discussion

The CLARIOstar microplate reader equipped with software- controlled programmable O2 and CO2 regulation was used in combination with MitoXpress- Intra Intracellular Oxygen Assay to induce a defined ischemia/reperfusion event in vitro using a liver and cardiac model (HepG2 and Cor.4U cells respectively) Fig.3 shows the precise atmospheric control achievable, with O2 reduced to 1%, maintained at this concentration for a pre-defined period and then rapidly increased to 18%. Parallel monitoring of MitoXpress Intra reveals the importance of real-time oxygenation monitoring, as cellular respiration significantly impacts oxygen concentrations at the cell monolayer. Antimycin treated HepG2 cells (no respiration), reflect instrument conditions (ACU) however respiring cells experience much lower resting oxygen concentrations and deeper more sustained hypoxia. This disparity between atmospheric and cellular O2 increases further when respiration is increased through FCCP treatment (uncoupled cells). Using real-time oxygenation monitoring, ACU parameters can therefore be modulated to achieve the desired cellular ischemia- reperfusion profile.

Ischemia-reperfusion proof-of-concept

Fig. 3: Ischemia-reperfusion proof-of-concept using HepG2 cells. Ischemia-reperfusion insult induced by modulating O2 in the measurement chamber. Cellular oxygenation is monitored in respiring, non-respiring (Antimycin treated), and uncoupled (FCCP treated) cells.

The approach was also evaluated using iPS-derived cardiomyocytes (Cor.4U cells) with parallel monitoring of MMP and ROS (Fig. 4). Non-respiring cells reflect ACU conditions, while respiring cells experience significantly reduced O2 concentrations.

The convenient multiplexing function of the CLARIOstar was used to measure MMP and cellular oxygenation in parallel. ROS measurements were also performed on the same text plate using DHE. Antimycin treatment blocks respiratory activity increasing cellular oxygenation to ambient levels (Fig. 4A) while also causing MMP dissipation (Fig. 4B) and increased ROS production returning (Fig. 4B).

Ischemia-reperfusion proof-of-concept

Fig. 4 (A-B): Multiparametric analysis of Cor4U cells during in vitro ischemia-reperfusion validating multiplexed measurement of MitoXpress-Intra and JC-1/DHE. Cell oxygenation traces describe depth and duration of Cor.4U ischemia-reperfusion

(A) with parallel monitoring of MMP and ROS (B).


The CLARIOstar microplate reader with ACU facilitates precise programmable control of both O2 and CO2, enabling the simulation of a hypoxic insult of defined depth and duration, while active venting enables rapid controlled reperfusion. Real-time oxygenation monitoring is realised using MitoXpress Intra in conjunction with pre-configured data analysis templates. Critically, this allows ACU para- meters to be modulated so that, at the cellular level, the desired depth and duration of hypoxic insult, and the required reperfusion rates are achieved. Multi-parametric analysis of key cellular parameter such as MMP and ROS can be performed during/after the ischemia reperfusion event.


  1. Hynes J, et al. 2015. Methods Mol Biol.,1264:203-17.
  2. Chapple S.J., et al 2016. Free Radic. Biol. Med., 92: 152-162

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